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Genomics
Combining multiplexed functional data to improve variant classification
3 days ago by
Atlas Of Variant Effects Alliance
and
others
Genomics
A Graph-based Approach to Variant Extraction
3 days ago by
Mark Santcroos
and
others
Genomics
,
Data Structures and Algorithms
Specialized Foundation Models Struggle to Beat Supervised Baselines
6 days ago by
Zongzhe Xu
and
others
Machine Learning
,
Artificial Intelligence
Application of Single-cell Deep Learning in Elucidating the Mapping Relationship Between Visceral and Body Surface Inflammatory Patterns
6 days ago by
Haixiang Huang
and
others
Genomics
Lyra: An Efficient and Expressive Subquadratic Architecture for Modeling Biological Sequences
7 days ago by
Krithik Ramesh
and
others
at
Broad Institute
Machine Learning
,
Genomics
Machine Learning-Based Genomic Linguistic Analysis (Gene Sequence Feature Learning): A Case Study on Predicting Heavy Metal Response Genes in Rice
7 days ago by
Ruiqi Yang
and
others
Machine Learning
,
Artificial Intelligence
RNA-FrameFlow: Flow Matching for de novo 3D RNA Backbone Design
18 March 2025 by
Rishabh Anand
and
others
at
National University of Singapore
Biomolecules
,
Machine Learning
Causes of evolutionary divergence in prostate cancer
17 March 2025 by
Emre Esenturk
and
others
Genomics
Bayesian Cox model with graph-structured variable selection priors for multi-omics biomarker identification
17 March 2025 by
Tobias Østmo Hermansen
and
others
Methodology
,
Genomics
GCBLANE: A graph-enhanced convolutional BiLSTM attention network for improved transcription factor binding site prediction
16 March 2025 by
Jonas Chris Ferrao
and
others
Machine Learning
,
Genomics
Computational identification of ketone metabolism as a key regulator of sleep stability and circadian dynamics via real-time metabolic profiling
16 March 2025 by
Hao Huang
and
others
Quantitative Methods
,
Genomics
Integrating Chain-of-Thought and Retrieval Augmented Generation Enhances Rare Disease Diagnosis from Clinical Notes
15 March 2025 by
Da Wu
and
others
Computation and Language
,
Artificial Intelligence
Simultaneous inference for generalized linear models with unmeasured confounders
15 March 2025 by
Jin-Hong Du
and
others
Methodology
,
Machine Learning
From de Bruijn graphs to variation graphs-relationships between pangenome models
14 March 2025 by
Adam Cicherski
and
Norbert Dojer
Genomics
,
Combinatorics
Proteome-wide prediction of mode of inheritance and molecular mechanism underlying genetic diseases using structural interactomics
14 March 2025 by
Ali Saadat
and
Jacques Fellay
Quantitative Methods
,
Genomics
Fine-tuning the ESM2 protein language model to understand the functional impact of missense variants
14 March 2025 by
Ali Saadat
and
Jacques Fellay
Quantitative Methods
,
Genomics
Learnable Group Transform: Enhancing Genotype-to-Phenotype Prediction for Rice Breeding with Small, Structured Datasets
14 March 2025 by
Yunxuan Dong
and
others
Genomics
scMEDAL for the interpretable analysis of single-cell transcriptomics data with batch effect visualization using a deep mixed effects autoencoder
13 March 2025 by
Aixa Andrade
and
others
at
UT Southwestern Medical Center
Machine Learning
,
Genomics
Terrier: A Deep Learning Repeat Classifier
12 March 2025 by
Robert Turnbull
and
others
Genomics
,
Machine Learning
Yeast poly(A)-binding protein (Pab1) controls translation initiation in vivo primarily by blocking mRNA decapping and decay
12 March 2025 by
P. Poonia
and
others
Genomics
Helix-mRNA: A Hybrid Foundation Model For Full Sequence mRNA Therapeutics
11 March 2025 by
Matthew Wood
and
others
Genomics
,
Artificial Intelligence
Regulatory DNA sequence Design with Reinforcement Learning
11 March 2025 by
Zhao Yang
and
others
Machine Learning
,
Genomics
Evaluation of altered cell-cell communication between glia and neurons in the hippocampus of 3xTg-AD mice at two time points
11 March 2025 by
T. Soelter
and
others
Genomics
Atlas of imprinted and allele-specific DNA methylation in the human body
11 March 2025 by
Jonathan Rosenski
and
others
at
Hebrew University of Jerusalem
Genomics
Bizard: A Community-Driven Platform for Accelerating and Enhancing Biomedical Data Visualization
10 March 2025 by
Kexin Li
and
others
Genomics
ALS molecular subtypes are a combination of cellular, genetic, and pathological features learned by deep multiomics classifiers
10 March 2025 by
Katie Oneill
and
others
Genomics
Draft genome sequences of four lactic acid bacteria from fermented chicken meat unveil biosynthetic gene clusters for antimicrobial compounds
10 March 2025 by
Mehebub Alam
and
others
Genomics
Regulatory plasticity of the human genome
8 March 2025 by
Jaya Srivastava
and
I. Ovcharenko
Genomics
Genome-wide profiling of highly similar paralogous genes using HiFi sequencing
8 March 2025 by
Xuhui Chen
and
others
Genomics
GoldPolish-Target: Targeted long-read genome assembly polishing
7 March 2025 by
Erhang Zhang
and
others
Genomics
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