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Bioinformatics
PBMCpedia: A Harmonized PBMC scRNA-seq Database With Unified Mapping and Enhanced Celltype Annotation
24 November 2025 by
E. Hoffmann
and
others
Bioinformatics
Click-qPCR: an ultra-simple tool for interactive qPCR data analysis
20 November 2025 by
Aya Kubota
and
Akiko Tajima
at
Kanazawa University
Bioinformatics
EAP: a versatile cloud-based platform for comprehensive and interactive analysis of large-scale ChIP/ATAC-seq data sets
14 November 2025 by
Hudong Chen
and
others
Bioinformatics
Coralysis enables sensitive identification of imbalanced cell types and states in single-cell data via multi-level integration
13 November 2025 by
A. G. G. Sousa
and
others
Bioinformatics
GWAS SVatalog: a visualization tool to aid fine-mapping of GWAS loci with structural variations
7 November 2025 by
S. Chirmade
and
others
Bioinformatics
Genome size estimation from long read overlaps
6 November 2025 by
M. Hall
and
L. J. M. Coin
Bioinformatics
Evolutionary and Structural Bioinformatics Reveal GPR89 as a Conserved Solute Carrier Transporter
3 November 2025 by
C. Quercia-Raty
and
others
Bioinformatics
Deep learning versus geometric morphometrics for archaeobotanical domestication study and subspecific identification
31 October 2025 by
V. Bonhomme
and
others
Bioinformatics
Tile-X: A vertex reordering approach for scalable long read assembly
30 October 2025 by
O. Bhowmik
and
Ananth Kalyanaraman
at
Washington State University
Bioinformatics
Estimating drivers of breast tissue transitions from normal to tumor state
30 October 2025 by
Subrata Kumar
and
V. Vindal
Bioinformatics
MARTi: a real-time analysis and visualisation tool for nanopore metagenomics
27 October 2025 by
N. Peel
and
others
at
Earlham Institute
Bioinformatics
Shared Transcriptomic Signatures Reveal Synaptic Pruning as a Link Between Alzheimer's Disease and Epilepsy
26 October 2025 by
Hang Li
and
others
Bioinformatics
CASTER-DTA: Equivariant Graph Neural Networks for Predicting Drug-Target Affinity
26 October 2025 by
Ravin Kumar
and
others
Bioinformatics
SaprotHub: Making Protein Modeling Accessible to All Biologists
24 October 2025 by
Junming Su
and
others
Bioinformatics
SPDEv3.0: A Multidisciplinary Integrated Data Analysis Platform
23 October 2025 by
Danyang Xu
Bioinformatics
Exploring GNRA tetraloop-like motifs in nucleic acid 3D structures
23 October 2025 by
J. Bujnicki
and
E. Baulin
Bioinformatics
Metagenomic Profiling of Drinking Water Microbiomes: Insights into Microbial Diversity and Antimicrobial Resistance
23 October 2025 by
Swati Sharma
and
others
Bioinformatics
Cross-talk quantification in molecular networks with application to pathway-pathway and cell-cell interactions.
22 October 2025 by
A. Chiodi
and
others
Bioinformatics
COSIME: Cooperative multi-view integration and Scalable and Interpretable Model Explainer
21 October 2025 by
Jae Jin Choi
and
others
Bioinformatics
Recommendations for Bioinformatics in Clinical Practice
17 October 2025 by
K. Lavrichenko
and
others
Bioinformatics
ANABAG: Annotated Antibody Antigen dataset with unique features for Antibody Engineering Applications
17 October 2025 by
I. Grandguillaume
and
others
Bioinformatics
Predicting the conformational flexibility of antibody and T-cell receptor CDRs
16 October 2025 by
F. Spoendlin
and
others
at
University of Oxford
Bioinformatics
Machine learning driven acceleration of biopharmaceutical formulation development using Excipient Prediction Software (ExPreSo)
15 October 2025 by
Estefania Vidal-Henriquez
and
others
Bioinformatics
IMGT(R) at scale: FAIR, Dynamic and Automated Tools for Immune Locus Analysis
14 October 2025 by
G. Sanou
and
others
Bioinformatics
Empathi: Embedding-based Phage Protein Annotation Tool by Hierarchical Assignment
14 October 2025 by
A. Boulay
and
others
Bioinformatics
Dynamics of duplicated gene regulatory networks governing cotton fiber development following polyploidy
9 October 2025 by
Xihan Xiong
and
others
Bioinformatics
Toggle-Untoggle: A cell segmentation tool with an interactive user verification interface.
9 October 2025 by
N. Grishchenko
and
others
at
Toronto Metropolitan University
Bioinformatics
Cleanet: robust doublet detection in cytometry data based on protein expression patterns
9 October 2025 by
Matei Ionita
and
others
Bioinformatics
Complex structural variant visualization with SVTopo
9 October 2025 by
J. Belyeu
and
others
Bioinformatics
Age-informed, attention-based weakly supervised learning for neuropathological image assessment
8 October 2025 by
Sixian Li
and
others
at
Boston University
Bioinformatics
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