Synthical
Your space
Profile
Activity
Favorites
Folders
Feeds
All articles
Claim page
K. E. Holt
Follow
Activity
Upvotes
Folders
Articles
57
Wild type domestication: loss of intrinsic metabolic traits concealed by culture in rich media
21 November 2024 by
B. Vezina
and
others
at
Monash University
Microbiology
A validated pangenome-scale metabolic model for the Klebsiella pneumoniae species complex
20 February 2024 by
H. Cooper
and
others
at
Monash University
Genomics
Direct inference and control of genetic population structure from RNA sequencing data
2 August 2023 by
M. Fachrul
and
others
Bioinformatics
Nanopore-only assemblies for genomic surveillance of the global priority drug-resistant pathogen, Klebsiella pneumoniae
8 February 2023 by
E. Foster-Nyarko
and
others
Genomics
Detection and typing of plasmids in Acinetobacter baumannii using rep genes encoding replication initiation proteins
6 December 2022 by
M. Lam
and
others
at
University of Technology Sydney
Microbiology
Epidemiology and genomic analysis of Klebsiella oxytoca from a single hospital network in Australia
24 August 2022 by
Jared Stewart
and
others
at
Monash University
Epidemiology
ESBL plasmids in Klebsiella pneumoniae: diversity, transmission, and contribution to infection burden in the hospital setting
23 August 2022 by
Jane Hawkey
and
others
at
Monash University
Genetic and Genomic Medicine
Genomic dissection of the bacterial population underlying Klebsiella pneumoniae infections in hospital patients: insights into an opportunistic pathogen
31 May 2022 by
C. Gorrie
and
others
Infectious Diseases
Transmission of Klebsiella strains and plasmids within and between Grey-headed flying fox colonies
20 May 2022 by
B. Vezina
and
others
at
Monash University
Microbiology
Linear plasmids in Klebsiella and other Enterobacteriaceae
13 April 2022 by
Jane Hawkey
and
others
at
Monash University
Microbiology
Whole genome sequence analysis of Salmonella Typhi in Papua New Guinea reveals an established population of genotype 2.1.7 sensitive to antimicrobials.
28 March 2022 by
Zoe Anne Dyson
and
others
Public and Global Health
A curated collection of Klebsiella metabolic models reveals variable substrate usage and gene essentiality
11 March 2022 by
Jane Hawkey
and
others
at
Monash University
Microbiology
Polypolish: short-read polishing of long-read bacterial genome assemblies
24 January 2022 by
R. Wick
and
K. Holt
at
Monash University
Bioinformatics
Context-aware genomic surveillance reveals hidden transmission of a carbapenemase-producing Klebsiella pneumoniae
16 December 2021 by
A. Viehweger
and
others
Microbiology
Genomic diversity and antimicrobial resistance of Haemophilus colonising the airways of young children with cystic fibrosis
15 September 2021 by
S. Watts
and
others
at
Monash University
Microbiology
Trycycler: consensus long-read assemblies for bacterial genomes
14 September 2021 by
R. Wick
and
others
at
Monash University
Bioinformatics
Multiple introductions of multidrug-resistant typhoid associated with acute infection and asymptomatic carriage, Kenya
13 September 2021 by
S. Kariuki
and
others
Physiology
Novel strains of Klebsiella africana and Klebsiella pneumoniae in Australian Fruit Bats (Pteropus poliocephalus)
7 September 2021 by
F. Mcdougall
and
others
at
Macquarie University
Microbiology
Five years of GenoTyphi: updates to the global Salmonella Typhi genotyping framework
28 August 2021 by
Zoe Anne Dyson
and
K. Holt
at
London School of Hygiene and Tropical Medicine
Microbiology
Recovery of small plasmid sequences via Oxford Nanopore sequencing
25 August 2021 by
R. Wick
and
others
at
Monash University
Bioinformatics
A Bayesian approach for estimating typhoid fever incidence from large-scale facility-based passive surveillance data
24 August 2021 by
M. Phillips
and
others
at
Yale School of Public Health
Epidemiology
Genomic surveillance of antimicrobial resistant bacterial colonisation and infection in intensive care patients
14 July 2021 by
Kelly Wyres
and
others
at
Monash University
Infectious Diseases
Gastrointestinal carriage of Klebsiella pneumoniae in a general adult population in Norway: a cross-sectional study of risk factors and bacterial genomic diversity
28 June 2021 by
N. Raffelsberger
and
others
Infectious Diseases
A global resource for genomic predictions of antimicrobial resistance and surveillance of Salmonella Typhi at Pathogenwatch
17 May 2021 by
S. Argimon
and
others
Genomics
Klebsiella MALDI TypeR: a web-based tool for Klebsiella identification based on MALDI-TOF mass spectrometry
15 May 2021 by
S. Bridel
and
others
at
Institut Pasteur
Bioinformatics
Global population structure and genotyping framework for genomic surveillance of the major dysentery pathogen, Shigella sonnei
11 May 2021 by
Jane Hawkey
and
others
at
Monash University
Microbiology
Detection of plasmid contigs in draft genome assemblies using customized Kraken databases
7 April 2021 by
R. Gomi
and
others
at
Kyoto University
Microbiology
Direct nanopore sequencing of mRNA reveals landscape of transcript isoforms in apicomplexan parasites
15 March 2021 by
V. Lee
and
others
at
University of Melbourne
Genomics
Genomic adaptations to an endolithic lifestyle in the coral-associated alga Ostreobium
6 February 2021 by
C. Iha
and
others
at
University of Melbourne
Genomics
Mercury methylation by metabolically versatile and cosmopolitan marine bacteria
27 January 2021 by
Huian Lin
and
others
at
University of Glasgow
Microbiology
Load more
This is an AI-generated summary
Key points
Topics
Microbiology
Genomics
Bioinformatics
Infectious Diseases
Epidemiology
Genetic and Genomic Medicine
Public and Global Health
Physiology
Evolutionary Biology