Articles by Alexander Yermanos | Synthical

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16

Learning immune receptor representations with protein language models

6 February 2024 by Andreas Dounas and others at

Quantitative Methods

Asymmetric cell division safeguards memory CD8 T cell development

12 May 2023 by F. Graebnitz and others at

Persistent virus-specific and clonally expanded antibody secreting cells respond to induced self antigen in the CNS

25 January 2023 by A. Agrafiotis and others

B cell clonal expansion is correlated with antigen-specificity in young but not old mice

25 January 2023 by A. Agrafiotis and others

Single-cell immune repertoire sequencing of B and T cells in murine models of infection and autoimmunity

26 August 2022 by D. Shlesinger and others

Echidna: integrated simulations of single-cell immune receptor repertoires and transcriptomes

26 August 2022 by Jiaojiao Han and others

Phenotypic determinism and stochasticity in antibody repertoires of clonally expanded plasma cells

29 April 2022 by D. Neumeier and others

DeepSARS: simultaneous diagnostic detection and genomic surveillance of SARS-CoV-2

11 April 2022 by Alexander Yermanos and others

Infectious Diseases

Clonally expanded virus-specific CD8 T cells acquire diverse transcriptional phenotypes during acute, chronic, and latent infections

2 February 2022 by Rudolf Kuhn and others

Discovery and validation of novel human genomic safe harbor sites for gene and cell therapies

14 January 2022 by E. Aznauryan and others at

A single-cell atlas of lymphocyte adaptive immune repertoires and transcriptomes reveals age-related differences in convalescent COVID-19 patients

12 July 2021 by F. Bieberich and others at

Platypus: an open-access software for integrating lymphocyte single-cell immune repertoires with transcriptomes

14 April 2021 by Alexander Yermanos and others

Single-cell immune repertoire and transcriptome sequencing reveals that clonally expanded and transcriptionally distinct lymphocytes populate the aged central nervous system in mice

24 February 2021 by Alexander Yermanos and others at

Profiling virus-specific Tcf1+ T cell repertoires during acute and chronic viral infection

29 May 2020 by Alexander Yermanos and others

immuneSIM: tunable multi-feature simulation of B- and T-cell receptor repertoires for immunoinformatics benchmarking

6 March 2020 by C. Weber and others at

University of Oslo

Computational strategies for dissecting the high-dimensional complexity of adaptive immune repertoires

29 November 2017 by Enkelejda Miho and others

Quantitative Methods

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Immunology Quantitative Methods Infectious Diseases Genomics Bioinformatics